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Electronic ground states and vibrational frequency shifts of diatomic ligands in heme adducts.

PubMed
Authors: Liu Y, Sun H

Year

2011

Paper ID

12332

Status

Peer-reviewed

Abstract Read

~2 min

Abstract Words

170

Citations

17

Abstract

DFT calculations were carried out to study heme complexes with diatomic ligand (CO, NO, or O(2)) and trans-imidazole ligand. The optimized electronic ground states of CO, NO, and O(2) adducts are singlet, doublet, and open-shell singlet, respectively. For O(2) adduct, the open-shell singlet is slightly lower in energy than the close-shell singlet. However, important differences are found in optimized structures and vibrational frequencies. Particularly, the trans-imidazole-induced frequency up-shift of the Fe-O(O) stretching mode can be predicted only with the open-shell singlet as ground state. An analysis of normal modes confirms that the up-shifts in the bent (NO and O(2) ) adducts are mainly due to mixing of Fe-X(O) stretching mode with Fe-X-O bending coordinate. Our study of binding mechanism indicates that a secondary source of the upshifts is the diminished weakening of the Fe-X(O) bonds. The Fe-X(O) bond strengths are modulated by σ competition mechanism, which weakens the Fe-X(O) bond and σ-π cooperation mechanism, which only exists in the bent adducts and enforce the Fe-X(O) bond. -

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  • This paper contributes to the Quantum Simulation research area in the Quantum Articles archive.
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  • DFT calculations were carried out to study heme complexes with diatomic ligand (CO, NO, or O(2)) and trans-imidazole ligand.

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