Quick Navigation

Topics

Quantum Chemistry

Transferability of atomic multipoles in amino acids and peptides for various density partitions.

PubMed
Authors: Woińska M, Dominiak PM

Year

2013

Paper ID

12152

Status

Peer-reviewed

Abstract Read

~2 min

Abstract Words

239

Citations

7

Abstract

Multipole expansion of electron density distribution is an efficient tool for evaluating the energy of interactions in molecules. In as much as atoms in macromolecules such as peptides are modeled with certain types of atoms derived from small organic molecules, investigating transferability of atomic multipoles for various partitions of molecular electron density is an important issue. In this study, multipole moments up to hexadecapoles for types of atoms present in selected amino acids, as well as di- and tripeptides composed of these amino acids, are computed using three density partitions: Hansen-Coppens aspherical pseudoatoms formalism, Hirshfeld's stockholder partition, and Bader's atoms in molecules theory. Electron density of relevant molecules is derived in a procedure including molecular wave function ab initio calculation for isolated molecules in geometry from X-ray measurements, calculation of theoretical structure factors for molecules put in a pseudocubic cell, and multipole refinement as in crystallographic data processing and computation of multipoles. The results were compared to calculations of multipole moments in AIM and in stockholder density partitions obtained directly from molecular wave functions. The presented comparison does not point unambiguously to any particular influence of multipole refinement on moments obtained from these two partitions. The advantage of stockholder partitioning in terms of transferability of atomic multipoles is affirmed. AIM and pseudoatoms provide slightly less transferable multipoles of lower order. Higher rank of multipole expansion reveals a transferability improvement in the case of AIM and meaningful deterioration for pseudoatoms.

Why This Paper Matters

  • This paper contributes to the Quantum Chemistry research area in the Quantum Articles archive.
  • It adds a 2013 reference point for readers tracking recent quantum research.
  • Multipole expansion of electron density distribution is an efficient tool for evaluating the energy of interactions in molecules.

Paper Tools

Become a member to use research tools

Sign in to open papers, visit source links, share, cite, compare, copy DOI links, request category corrections, and build your reading list.

Publisher Share Cite This Paper Copy URL Compare Copy DOI Add to Reading List Category Correction Request

References & Citation Signals

Local Citation Graph (Related-Paper Links)

Current Paper #12152 #78837 TLS loss in superconducting res... #78797 Local polarization control of o... #78792 Demonstration of subspace-searc...

External citation index: OpenAlex citation signal • updated 2026-10-22 10:32:54

Community Reactions

Quick sentiment from readers on this paper.

Score: 0
Likes: 0 Dislikes: 0

Sign in to react to this paper.

Discussion & Reviews (Moderated)

Average Rating: 0.0 / 5 (0 ratings)

No written reviews yet.